Index

A

AdaBound (class in bob.ip.binseg.engine.adabound) AdaBoundW (class in bob.ip.binseg.engine.adabound) all_keys_match() (bob.ip.binseg.data.utils.SampleListDataset method) (bob.ip.binseg.data.utils.SSLDataset method) alpha (bob.ip.binseg.models.losses.HEDSoftJaccardBCELogitsLoss attribute) (bob.ip.binseg.models.losses.SoftJaccardBCELogitsLoss attribute)

auc() (in module bob.ip.binseg.utils.measure) augment_subset() (in module bob.ip.binseg.configs.datasets) AutoLevel16to8 (class in bob.ip.binseg.data.transforms) avg() (bob.ip.binseg.utils.measure.SmoothedValue property)

B

base_measures() (in module bob.ip.binseg.utils.measure) bob.ip.binseg.configs.datasets (module) bob.ip.binseg.configs.datasets.chasedb1.covd (module) bob.ip.binseg.configs.datasets.chasedb1.first_annotator (module) bob.ip.binseg.configs.datasets.chasedb1.mtest (module) bob.ip.binseg.configs.datasets.chasedb1.second_annotator (module) bob.ip.binseg.configs.datasets.chasedb1.ssl (module) bob.ip.binseg.configs.datasets.chasedb1.xtest (module) bob.ip.binseg.configs.datasets.csv (module) bob.ip.binseg.configs.datasets.drionsdb.expert1 (module) bob.ip.binseg.configs.datasets.drionsdb.expert2 (module) bob.ip.binseg.configs.datasets.drishtigs1.cup_all (module) bob.ip.binseg.configs.datasets.drishtigs1.cup_any (module) bob.ip.binseg.configs.datasets.drishtigs1.disc_all (module) bob.ip.binseg.configs.datasets.drishtigs1.disc_any (module) bob.ip.binseg.configs.datasets.drive.covd (module) bob.ip.binseg.configs.datasets.drive.default (module) bob.ip.binseg.configs.datasets.drive.mtest (module) bob.ip.binseg.configs.datasets.drive.second_annotator (module) bob.ip.binseg.configs.datasets.drive.ssl (module) bob.ip.binseg.configs.datasets.drive.xtest (module) bob.ip.binseg.configs.datasets.hrf.covd (module) bob.ip.binseg.configs.datasets.hrf.default (module) bob.ip.binseg.configs.datasets.hrf.default_fullres (module) bob.ip.binseg.configs.datasets.hrf.mtest (module) bob.ip.binseg.configs.datasets.hrf.ssl (module) bob.ip.binseg.configs.datasets.hrf.xtest (module) bob.ip.binseg.configs.datasets.iostar.covd (module) bob.ip.binseg.configs.datasets.iostar.optic_disc (module) bob.ip.binseg.configs.datasets.iostar.ssl (module) bob.ip.binseg.configs.datasets.iostar.vessel (module) bob.ip.binseg.configs.datasets.iostar.vessel_mtest (module) bob.ip.binseg.configs.datasets.iostar.vessel_xtest (module) bob.ip.binseg.configs.datasets.refuge.cup (module) bob.ip.binseg.configs.datasets.refuge.disc (module) bob.ip.binseg.configs.datasets.rimoner3.cup_exp1 (module) bob.ip.binseg.configs.datasets.rimoner3.cup_exp2 (module) bob.ip.binseg.configs.datasets.rimoner3.disc_exp1 (module) bob.ip.binseg.configs.datasets.rimoner3.disc_exp2 (module) bob.ip.binseg.configs.datasets.stare.ah (module) bob.ip.binseg.configs.datasets.stare.covd (module) bob.ip.binseg.configs.datasets.stare.mtest (module) bob.ip.binseg.configs.datasets.stare.ssl (module) bob.ip.binseg.configs.datasets.stare.vk (module) bob.ip.binseg.configs.datasets.stare.xtest (module) bob.ip.binseg.configs.models.driu (module) bob.ip.binseg.configs.models.driu_bn (module) bob.ip.binseg.configs.models.driu_bn_ssl (module) bob.ip.binseg.configs.models.driu_od (module)

bob.ip.binseg.configs.models.driu_ssl (module) bob.ip.binseg.configs.models.hed (module) bob.ip.binseg.configs.models.m2unet (module) bob.ip.binseg.configs.models.m2unet_ssl (module) bob.ip.binseg.configs.models.resunet (module) bob.ip.binseg.configs.models.unet (module) bob.ip.binseg.data.chasedb1 (module) bob.ip.binseg.data.dataset (module) bob.ip.binseg.data.drionsdb (module) bob.ip.binseg.data.drishtigs1 (module) bob.ip.binseg.data.drive (module) bob.ip.binseg.data.hrf (module) bob.ip.binseg.data.iostar (module) bob.ip.binseg.data.loader (module) bob.ip.binseg.data.refuge (module) bob.ip.binseg.data.rimoner3 (module) bob.ip.binseg.data.sample (module) bob.ip.binseg.data.stare (module) bob.ip.binseg.data.transforms (module) bob.ip.binseg.data.utils (module) bob.ip.binseg.engine (module) bob.ip.binseg.engine.adabound (module) bob.ip.binseg.engine.evaluator (module) bob.ip.binseg.engine.predictor (module) bob.ip.binseg.engine.ssltrainer (module) bob.ip.binseg.engine.trainer (module) bob.ip.binseg.models (module) bob.ip.binseg.models.backbones (module) bob.ip.binseg.models.backbones.mobilenetv2 (module) bob.ip.binseg.models.backbones.resnet (module) bob.ip.binseg.models.backbones.vgg (module) bob.ip.binseg.models.driu (module) bob.ip.binseg.models.driu_bn (module) bob.ip.binseg.models.driu_od (module) bob.ip.binseg.models.driu_pix (module) bob.ip.binseg.models.hed (module) bob.ip.binseg.models.losses (module) bob.ip.binseg.models.lwnet (module) bob.ip.binseg.models.m2unet (module) bob.ip.binseg.models.make_layers (module) bob.ip.binseg.models.normalizer (module) bob.ip.binseg.models.resunet (module) bob.ip.binseg.models.unet (module) bob.ip.binseg.utils (module) bob.ip.binseg.utils.checkpointer (module) bob.ip.binseg.utils.measure (module) bob.ip.binseg.utils.plot (module) bob.ip.binseg.utils.summary (module) bob.ip.binseg.utils.table (module)

C

CenterCrop (class in bob.ip.binseg.data.transforms) check() (bob.ip.binseg.data.dataset.CSVDataset method) (bob.ip.binseg.data.dataset.JSONDataset method) Checkpointer (class in bob.ip.binseg.utils.checkpointer) ColorJitter (class in bob.ip.binseg.data.transforms) compare_annotators() (in module bob.ip.binseg.engine.evaluator) Compose (class in bob.ip.binseg.data.transforms) ConcatFuseBlock (class in bob.ip.binseg.models.driu) (class in bob.ip.binseg.models.driu_bn) (class in bob.ip.binseg.models.hed)

conv_with_kaiming_uniform() (in module bob.ip.binseg.models.make_layers) ConvBlock (class in bob.ip.binseg.models.lwnet) ConvBridgeBlock (class in bob.ip.binseg.models.lwnet) convtrans_with_kaiming_uniform() (in module bob.ip.binseg.models.make_layers) copy() (bob.ip.binseg.data.utils.SampleListDataset method) Crop (class in bob.ip.binseg.data.transforms) CSVDataset (class in bob.ip.binseg.data.dataset)

D

data() (bob.ip.binseg.data.sample.DelayedSample property) dataset (in module bob.ip.binseg.data.chasedb1) (in module bob.ip.binseg.data.drionsdb) (in module bob.ip.binseg.data.drishtigs1) (in module bob.ip.binseg.data.drive) (in module bob.ip.binseg.data.hrf) (in module bob.ip.binseg.data.iostar) (in module bob.ip.binseg.data.refuge) (in module bob.ip.binseg.data.rimoner3) (in module bob.ip.binseg.data.stare)

DecoderBlock (class in bob.ip.binseg.models.m2unet) DelayedSample (class in bob.ip.binseg.data.sample) DRIU (class in bob.ip.binseg.models.driu) driu() (in module bob.ip.binseg.models.driu) driu_bn() (in module bob.ip.binseg.models.driu_bn) driu_od() (in module bob.ip.binseg.models.driu_od) driu_pix() (in module bob.ip.binseg.models.driu_pix) DRIUBN (class in bob.ip.binseg.models.driu_bn) DRIUOD (class in bob.ip.binseg.models.driu_od) DRIUPIX (class in bob.ip.binseg.models.driu_pix)

F

forward() (bob.ip.binseg.models.backbones.mobilenetv2.MobileNetV24Segmentation method) (bob.ip.binseg.models.backbones.resnet.ResNet4Segmentation method) (bob.ip.binseg.models.backbones.vgg.VGG4Segmentation method) (bob.ip.binseg.models.driu.ConcatFuseBlock method) (bob.ip.binseg.models.driu.DRIU method) (bob.ip.binseg.models.driu_bn.ConcatFuseBlock method) (bob.ip.binseg.models.driu_bn.DRIUBN method) (bob.ip.binseg.models.driu_od.DRIUOD method) (bob.ip.binseg.models.driu_pix.DRIUPIX method) (bob.ip.binseg.models.hed.ConcatFuseBlock method) (bob.ip.binseg.models.hed.HED method) (bob.ip.binseg.models.losses.HEDSoftJaccardBCELogitsLoss method) (bob.ip.binseg.models.losses.HEDWeightedBCELogitsLoss method) (bob.ip.binseg.models.losses.MixJacLoss method) (bob.ip.binseg.models.losses.SoftJaccardBCELogitsLoss method) (bob.ip.binseg.models.losses.WeightedBCELogitsLoss method) (bob.ip.binseg.models.lwnet.ConvBlock method) (bob.ip.binseg.models.lwnet.ConvBridgeBlock method) (bob.ip.binseg.models.lwnet.LittleUNet method) (bob.ip.binseg.models.lwnet.LittleWNet method) (bob.ip.binseg.models.lwnet.UpConvBlock method) (bob.ip.binseg.models.lwnet.UpsampleBlock method) (bob.ip.binseg.models.m2unet.DecoderBlock method) (bob.ip.binseg.models.m2unet.LastDecoderBlock method) (bob.ip.binseg.models.m2unet.M2UNet method) (bob.ip.binseg.models.make_layers.PixelShuffle_ICNR method) (bob.ip.binseg.models.make_layers.UnetBlock method) (bob.ip.binseg.models.make_layers.UpsampleCropBlock method) (bob.ip.binseg.models.normalizer.TorchVisionNormalizer method) (bob.ip.binseg.models.resunet.ResUNet method) (bob.ip.binseg.models.unet.UNet method)

G

guess_labels() (in module bob.ip.binseg.engine.ssltrainer)

H

h (bob.ip.binseg.data.transforms.Crop attribute) (bob.ip.binseg.data.transforms.SingleCrop attribute) has_checkpoint() (bob.ip.binseg.utils.checkpointer.Checkpointer method)

HED (class in bob.ip.binseg.models.hed) hed() (in module bob.ip.binseg.models.hed) HEDSoftJaccardBCELogitsLoss (class in bob.ip.binseg.models.losses) HEDWeightedBCELogitsLoss (class in bob.ip.binseg.models.losses)

I

i (bob.ip.binseg.data.transforms.Crop attribute) (bob.ip.binseg.data.transforms.SingleCrop attribute) icnr() (in module bob.ip.binseg.models.make_layers)

ifnone() (in module bob.ip.binseg.models.make_layers) insert() (bob.ip.binseg.data.sample.SampleSet method) invert_mode1_image() (in module bob.ip.binseg.data.utils)

J

j (bob.ip.binseg.data.transforms.Crop attribute) (bob.ip.binseg.data.transforms.SingleCrop attribute)

JSONDataset (class in bob.ip.binseg.data.dataset)

K

keys() (bob.ip.binseg.data.utils.SampleListDataset method) (bob.ip.binseg.data.utils.SSLDataset method)

L

last_checkpoint() (bob.ip.binseg.utils.checkpointer.Checkpointer method) LastDecoderBlock (class in bob.ip.binseg.models.m2unet) linear_rampup() (in module bob.ip.binseg.engine.ssltrainer) LittleUNet (class in bob.ip.binseg.models.lwnet) LittleWNet (class in bob.ip.binseg.models.lwnet)

load() (bob.ip.binseg.utils.checkpointer.Checkpointer method) load_pil_1() (in module bob.ip.binseg.data.loader) load_pil_rgb() (in module bob.ip.binseg.data.loader) loss_curve() (in module bob.ip.binseg.utils.plot) lunet() (in module bob.ip.binseg.models.lwnet) lwnet() (in module bob.ip.binseg.models.lwnet)

M

M2UNet (class in bob.ip.binseg.models.m2unet) m2unet() (in module bob.ip.binseg.models.m2unet) make_dataset() (in module bob.ip.binseg.configs.datasets) make_delayed() (in module bob.ip.binseg.data.loader) make_subset() (in module bob.ip.binseg.configs.datasets)

median() (bob.ip.binseg.utils.measure.SmoothedValue property) mix_up() (in module bob.ip.binseg.engine.ssltrainer) MixJacLoss (class in bob.ip.binseg.models.losses) mobilenet_v2_for_segmentation() (in module bob.ip.binseg.models.backbones.mobilenetv2) MobileNetV24Segmentation (class in bob.ip.binseg.models.backbones.mobilenetv2)

O

overlayed_image() (in module bob.ip.binseg.data.utils)

P

Pad (class in bob.ip.binseg.data.transforms) performance_table() (in module bob.ip.binseg.utils.table)

PixelShuffle_ICNR (class in bob.ip.binseg.models.make_layers) precision_recall_f1iso() (in module bob.ip.binseg.utils.plot)

R

RANDOM_FLIP_JITTER (in module bob.ip.binseg.configs.datasets) RANDOM_ROTATION (in module bob.ip.binseg.configs.datasets) RandomHorizontalFlip (class in bob.ip.binseg.data.transforms) RandomRotation (class in bob.ip.binseg.data.transforms) RandomVerticalFlip (class in bob.ip.binseg.data.transforms) Resize (class in bob.ip.binseg.data.transforms) ResNet4Segmentation (class in bob.ip.binseg.models.backbones.resnet)

resnet50_for_segmentation() (in module bob.ip.binseg.models.backbones.resnet) ResUNet (class in bob.ip.binseg.models.resunet) resunet50() (in module bob.ip.binseg.models.resunet) run() (in module bob.ip.binseg.engine.evaluator) (in module bob.ip.binseg.engine.predictor) (in module bob.ip.binseg.engine.ssltrainer) (in module bob.ip.binseg.engine.trainer)

S

Sample (class in bob.ip.binseg.data.sample) sample_measures_for_threshold() (in module bob.ip.binseg.engine.evaluator) SampleListDataset (class in bob.ip.binseg.data.utils) samples() (bob.ip.binseg.data.dataset.CSVDataset method) SampleSet (class in bob.ip.binseg.data.sample) save() (bob.ip.binseg.utils.checkpointer.Checkpointer method) sharpen() (in module bob.ip.binseg.engine.ssltrainer) SingleAutoLevel16to8 (class in bob.ip.binseg.data.transforms) SingleCrop (class in bob.ip.binseg.data.transforms) SingleToRGB (class in bob.ip.binseg.data.transforms)

SmoothedValue (class in bob.ip.binseg.utils.measure) SoftJaccardBCELogitsLoss (class in bob.ip.binseg.models.losses) square_rampup() (in module bob.ip.binseg.engine.ssltrainer) SSLDataset (class in bob.ip.binseg.data.utils) step() (bob.ip.binseg.engine.adabound.AdaBound method) (bob.ip.binseg.engine.adabound.AdaBoundW method) subsets() (bob.ip.binseg.data.dataset.CSVDataset method) (bob.ip.binseg.data.dataset.JSONDataset method) subtract_mode1_images() (in module bob.ip.binseg.data.utils) summary() (in module bob.ip.binseg.utils.summary)

T

torch_evaluation() (in module bob.ip.binseg.engine.trainer) TorchVisionNormalizer (class in bob.ip.binseg.models.normalizer) ToRGB (class in bob.ip.binseg.data.transforms) ToTensor (class in bob.ip.binseg.data.transforms)

transforms (bob.ip.binseg.data.utils.SampleListDataset attribute) transforms() (bob.ip.binseg.data.utils.SampleListDataset property) tricky_division() (in module bob.ip.binseg.utils.measure) TupleMixin (class in bob.ip.binseg.data.transforms)

U

UNet (class in bob.ip.binseg.models.unet) unet() (in module bob.ip.binseg.models.unet) UnetBlock (class in bob.ip.binseg.models.make_layers)

UpConvBlock (class in bob.ip.binseg.models.lwnet) update() (bob.ip.binseg.utils.measure.SmoothedValue method) UpsampleBlock (class in bob.ip.binseg.models.lwnet) UpsampleCropBlock (class in bob.ip.binseg.models.make_layers)

V

vgg16_bn_for_segmentation() (in module bob.ip.binseg.models.backbones.vgg)

vgg16_for_segmentation() (in module bob.ip.binseg.models.backbones.vgg) VGG4Segmentation (class in bob.ip.binseg.models.backbones.vgg)

W

w (bob.ip.binseg.data.transforms.Crop attribute) (bob.ip.binseg.data.transforms.SingleCrop attribute)

weak_script_method() (in module bob.ip.binseg.models.losses) WeightedBCELogitsLoss (class in bob.ip.binseg.models.losses)